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#!/usr/bin/env luajit

--[[ Read the README file for what this is all about.
     If there is no README or similar, then you can find the link to the source below.

    Normally I define functions and globals at the top, but here I'm interleaving them.
]]

local Lunamark = require("lunamark")	-- https://github.com/jgm/lunamark
local Lpeg = require("lpeg")		-- https://www.inf.puc-rio.br/~roberto/lpeg/lpeg.html  Lunamark uses this, so we can to.
local RE = require("re")		-- Part of lpeg.  https://www.inf.puc-rio.br/~roberto/lpeg/re.html


---------------------------------------------------------------------------------
-- Some global data.

local GlobalMetaData = {
    dlr = '$', perc = '%',
    devuanCinnabarDark   = '#310202',    devuanCinnabarLight  = '#510505',
    devuanDarkPurpyDark  = '#33313b',    devuanDarkPurpyLight = '#3c3a45',
    devuanDeepSeaDark    = '#132f40',    devuanDeepSeaLight   = '#1a4562',
    devuanSaphireDark    = '#004489',    devuanSaphireLight   = '#00509f',
    devuanDevuanDark     = '#000000',    devuanDevuanLight    = '#ffffff',
    -- HTML link colours.  Naturally HTML5 deprecated the simple version, replacing it with less simple CSS.
    -- <body> has alink, link, vlink; CSS has active, link, visited, and hover.
    devuanDevuanalink    = '#03a4ff',    devuanDevuanlink     = '#0076b6',    devuanDevuanvlink    = '#6aa4db',   devuanDevuanhlink   = '#03a4ff',
    devuanSDevuanalink   = '#98c3db',    devuanSDevuanlink    = '#ffffff',    devuanSDevuanvlink   = '#ffffff',   devuanSDevuanhlink  = '#98c3db',
    karenPurple          = '#8800ff',    onefangPurple        = '#cc00ff',
    PinkFloyd            = '#AA00AA',    DeepPurple           = '#220022',	-- From an ancient site of mine, which went from PinkFloyd to DeepPurple as a background gradient.
    favicon = 'nYAW_icon.png', logo = 'nYAW.png',
    footer = 'Powered by <a href="https://sledjhamr.org/cgit/notYetAnotherWiki/about/">notYetAnotherWiki</a> version 0.0. &nbsp;',
}

local Files, Subs, xLinks = {}, {}, {}

local Template = ''
local h = io.open("default.template", 'r')
if nil ~= h then
    Template = h:read('*a')
    h:close()
else
    print('oops! No such file ' .. 'default.template')
end


---------------------------------------------------------------------------------
-- Useful functions, part 0.

-- A simple table.subtable = subtable wont work, you end up with a reference so that changes to the later get applied to the former.
local derefiTable = function(t, strip)
    local argh = {}
    for l, y in ipairs(t) do	if (l ~= y.name) and strip then table.insert(argh, y) end	end
    return argh
end
local derefTable = function(t, strip)
    local argh = {}
    for l, y in pairs(t) do	argh[l] = y end
    return argh
end


local writeString = function(base, body)
    local a, e = io.open(base, 'w')
    if nil == a then print('Could not open ' .. base .. ' - ' .. e) else
	a:write(body)
	a:close()
    end
end


-- String together the bits array into a path string.  Or the other way around.  lol
local stringBits = function(l)
    local bits = {}
    local last = 1
    for j = 1, #l do
	if '/' == string.sub(l, j, j) then
	    table.insert(bits, string.sub(l, last, j - 1))
	    last = j + 1
	end
    end
    return bits, string.sub(l, last)
end


-- Put a value into the Files or Subs table, creating things if needed.
local toFile = function(name, key, value)
    if nil == Files[name] then
	local bits, bit = stringBits(name)
	local path = ''
	Files[name] = {}
	Files[name].bits = bits
	Files[name].bit = bit
	for i, d in ipairs(bits) do
	    if '' ~= path then path = path .. '/' end
	    path = path .. d
	end
	Files[name].path = path
--	Files[name].body = ''
	if ("Foswiki" == bits[1]) or ("PmWiki" == bits[1]) then Files[name].ogWiki = bits[1] end
    end
    if nil ~= key         then Files[name][key] = value end
    for i, v in ipairs{'metadata', 'bits', } do
	if nil == Files[name][v] then Files[name][v] = {} end
    end
    -- Open the files and do the initial cleanups.
    local body = ''
    if '.md' ~= string.sub(name, -3, -1) then
	h = io.open(name .. '.md', 'r')
	if nil ~= h then
--	    print('Parsing ' .. name .. '.md')
	    body = h:read('*a') ; h:close()
	    -- Deal with my typical double spaced sentence endings, and other things.
	    local result = RE.compile( [=[{~
 (
  {[.?!]{"  "}}              -> '%1&nbsp;' /		-- '&nbsp;' gets turned into hex 0xA0 by parse().  So feed it another metadata token that gets translated to &nbsp;.  Seems we now skip this issue.
  {[\\]{['"|$]}}             -> '%2' /			-- Do the same for fixing the \' \" \| etc mess pandoc left.
  {"[" {([^]])+} "]{.foswiki" {([^FG}])+} "FG}" }  -> "<span style='color: %3;'>%2</span>" /
  {"::: {."[A-Za-z_. ]+"}"}  -> '' /
  {":::"}                    -> '' /
  {"-noComment-"}            -> ' -- ' /
  {"{#"[A-Za-z_]+"}"}        -> '' /
  .
 )* ~}]=],   { } ):match(body)
	    body = result
--  {"<!--".*"-->"}          -> '' /
--  {"[$]"}                  -> '$dlr$' /		-- Replace $, coz otherwise it confuses things later.
	    body = RE.gsub(body, '{[$]}', '$dlr$')
--  {"[%]"}                  -> '$perc$' /		-- Gotta be done after the %1's above. otherwise screws things up when included above.
--	    body = RE.gsub(body, '{[%]}', '$perc$')	-- Coz otherwise stray % trip up the capture part.
	end
	Files[name].body = body
    end
end
local toSub = function(name, key, value)
    if nil == Subs[name] then
	local bits, bit = stringBits(name)
	local path = ''
	Subs[name] = {}
	table.insert(bits, bit)
	Subs[name].bits = bits
	Subs[name].bit = bit
	for i, d in ipairs(bits) do
	    if '' ~= path then path = path .. '/' end
	    path = path .. d
	end
	Subs[name].path = path
    end
    if nil ~= key        then Subs[name][key] = value end
    for i, v in ipairs{'metadata', 'bits', 'files', 'subs'} do
	if nil == Subs[name][v] then Subs[name][v] = {} end
    end
end



---------------------------------------------------------------------------------
-- Actually start doing things.

-- Create the base of everything.md here, so it gets picked up as usual in the file scan.
h = io.open('everything.md', 'w')
if nil ~= h then
    h:close()
else
    print("Can't open everything.md for writing.")
end


-- Scan the subdirectories looking for our files.
local Directory = arg[1]
toSub('')
if nil == Directory then Directory = '.' end

for l in io.popen('find -L ' .. Directory .. ' -name "*.HTM" -type f,l -printf "%P\n"'):lines() do
--    print('pandoc converting '  .. l .. ' -> ' .. string.sub(l, 1, -4) .. 'md')
    -- Open the HTM files and do the initial cleanups, then pandoc them.
    h = io.open(l, 'r')
    if nil ~= h then
	local body = h:read('*a') ; h:close()
	if 'Foswiki' == string.sub(l, 1, 7) then
	    -- Strip out the actual content.
	    local beg, en = RE.find(body, [['<div id="patternMainContents">']])	if nil ~= beg then body = string.sub(body, en + 1)  end
		  beg, en = RE.find(body, [['<div class="patternContent">']])	if nil ~= beg then body = string.sub(body, en + 1)  end
		  beg, en = RE.find(body, [['<div class="foswikiTopic">']])	if nil ~= beg then
		if ' -- ' == string.sub(body, en + 1, en + 4) then
		    beg, en = RE.find(body, '[%nl]', en + 4)
		    body = string.sub(body, en + 1)
		end
	    end
		  beg, en = RE.find(body, [['<div class="patternInfo">']])							if nil ~= beg then body = string.sub(body, 1, beg - 1) end
--		  beg, en = RE.find(body, [['<div class="foswikiForm foswikiFormStep">']])					if nil ~= beg then body = string.sub(body, 1, en + 1) end
		  beg, en = RE.find(body, [['<div class="foswikiAttachments foswikiFormStep" style="overflow:auto">']])		if nil ~= beg then body = string.sub(body, 1, beg - 1) end
		  beg, en = RE.find(body, [['<div class="foswikiSearchResultsPager">']])					if nil ~= beg then body = string.sub(body, 1, beg - 1) end
	    -- Some clean ups.
	    local result = RE.compile( [[{~
 (
  {'class="foswikiCurrentTopicLink"'}     -> blank /
  {'class="foswikiNewLink"'}     -> blank /
  {" -- "}                       -> '-noComment-' /
--  {"-- " ([^%nl])* }             -> blank /
  {'<div class="foswikiTopic">'} -> blank /
  {'rel="nofollow"'}             -> blank / {"rel='nofollow'"}             -> blank /
  {"target='_blank'"}            -> blank /
  {"</div>" ([%nl])* }           -> blank /
  {'style="' ([^"])+ '"'}        -> ''    / {"style='" ([^'])+ "'"}        -> '' /
  .
 )* ~}]],   { blank = function(a) return '' end } ):match(body)
	    body = result
--	    body = RE.gsub(body, [=[{"<!-- ".*"-->"}]=], '')	-- FIXME
	    writeString(l .. '_NEW', body)
	elseif 'PmWiki'  == string.sub(l, 1, 6) then
	    local beg, en = RE.find(body, [['<!--PageText-->']])	if nil ~= beg then body = string.sub(body, en + 2)  end
		  beg, en = RE.find(body, [["div id='wikitext'>"]])	if nil ~= beg then body = string.sub(body, en + 2)  end
		  beg, en = RE.find(body, [["<div id='printfoot'>"]])		if nil ~= beg then body = string.sub(body, 1, beg - (2 + 9)) end	-- There's a </div> to get rid of to.
		  beg, en = RE.find(body, [['<!--HTMLFooter-->']])		if nil ~= beg then body = string.sub(body, 1, beg - 2) end
	    local result = RE.compile( [[{~
 (
  {"class='categorylink'"}       -> blank /
  {"class='createlink'"}         -> blank /
  {"class='createlinktext'"}     -> blank /
  {"class='escaped'"}            -> blank /
  {"class='diffmarkup'"}         -> blank /
  {"class='selflink'"}           -> blank /
  {"class='urllink'"}            -> blank /
  {"<div class='vspace'></div><hr /> <a class='wikilink' href='https://wiki.devuan.org?n=Profiles." .* ([%nl])* } -> blank /
  {"<a class='selflink' href='https://wiki.devuan.org?n=Profiles." .* ([%nl])* } -> blank /
  {"<div class='vspace'></div><hr />"} -> blank /
  {"<div class='vspace'></div>"} -> blank /
  {"class='wikilink'"}           -> blank /
  {'rel="nofollow"'}             -> blank / {"rel='nofollow'"}             -> blank /
  {"target='_blank'"}            -> blank /
  {'style="' ([^"])+ '"'}        -> ''    / {"style='" ([^'])+ "'"}        -> '' /
  {"<span class='hlt " {([a-z])+} "'></span><pre" }  -> "<pre class='%2'" /
  .
 )* ~}]],   { blank = function(a) return '' end } ):match(body)
	    body = result
	    writeString(l .. '_NEW', body)
	end
    end

    ok, rslt, status = os.execute('pandoc -f html -t commonmark_x --self-contained ' .. l .. '_NEW' .. ' >' .. string.sub(l, 1, -4) .. 'md')
end

if '.' ~= Directory then
    for l in io.popen('find -L . -name "*.md" -type f,l -printf "%P\n"'):lines() do
	toFile(string.gsub(l, '%.md$', ''))
    end
end

-- Can add in a distant directory to, for putting it's results in the current directory.
for l in io.popen('find -L ' .. Directory .. ' -name "*.md" -type f,l -printf "%P\n"'):lines() do
    local n = string.gsub(l, '%.md$', '')
    if nil == Files[n] then toFile(n) end
end


-- Gotta figure out all the files and subs first.  File and sub metadata comes along for the ride, coz we need them later.
local NewMeta = {}
for name, file in pairs(Files) do
    local bitter, path = '', ''
    local bits, bit = file.bits, file.bit
    local ln = #bits
    local body, metadata = '', {}

    -- Go through our bits, construct Subs with bits.
    if ln > 0 then bitter = bits[1] end
    if '' ~= bitter then Subs[''].subs[bitter] = bitter end	-- "bitter end" was entirely by accident, I'm keeping it.  B-)
    for i, d in ipairs(bits) do
	if '' ~= path then path = path .. '/' end
	path = path .. d
	toSub(path)
	if i < ln 		then
	    Subs[path].subs[bits[i + 1]] = bits[i + 1]
	    table.remove(Subs[path].bits, #bits)
	end
    end

    if '.md' == string.sub(name, -3, -1) then
	-- This is a metadata only file, no content, stash the matadata.
	local h1 = io.open(name .. '.md')
	if nil == h1 then print('Could not open ' .. name .. '.md') else
	    for l in h1:lines() do
		for k, v in string.gmatch(l, "(%w+)%s*=%s*(.+)") do 
		    if nil == v then
			print(name .. ' ' .. k)
		    else
			metadata[k] = v
		    end
		end
	    end
	end
	if '.md' == name                          then toSub(path, 'metadata', metadata)
	elseif '/.md' == string.sub(name, -4, -1) then toSub(path, 'metadata', metadata)
--	else                                           toFile(string.sub(name, 1, -4), 'metadata', metadata)
	else						NewMeta[string.sub(name, 1, -4)] = metadata	-- Coz we can't add to Files here.
	end
	Files[name] = nil
    end
end

-- FIXED - Lua doesn't like modifying the thing you are pair()ing, like we want to do in the last loop.
for name, file in pairs(NewMeta) do
    if nil == Files[name] then toFile(name) end
    for k, v in pairs(file) do
	if nil == Files[name].metadata[k] then Files[name].metadata[k] = v end
    end
end

-- Fix up subs now we have all the file bits.
for name, file in pairs(Files) do
    if '.md' ~= string.sub(name, -3, -1) then
	table.insert(Subs[file.path].files, file.bit)
    end
end



---------------------------------------------------------------------------------
-- These functions assume the above file and sub scan has completed.

-- Which page in this directory should we show?
-- NOTE - only looking for the .md files we scanned for before, any stray HTML, html, HTM, and htm files will get ignored.
local whichPage = function(f)
    local fl = ''
    if nil ~= Subs[f] then
	if nil ~= Subs[f].whichPage then return Subs[f].whichPage end
	if nil ~= Subs[f].files then
	    if 1 == #(Subs[f].files) then	fl = Subs[f].files[1] else
		-- Standard files to search for.
		for i, v in ipairs{'about', 'readme', 'index', 'homepage', 'mainpage', 'webhome'} do
		    for j, w in ipairs(Subs[f].files) do
			if v == string.lower(w) then
			    fl = w
			    break
			end
		    end
		    if '' ~= fl then break end
		end
		-- If nothing else, just grab the first one.
		if ('' == fl) and (nil ~= Subs[f].files[1]) then fl = Subs[f].files[1] end
	    end
	end
    end
    if '' ~= fl then fl = fl .. '.HTML' ; Subs[f].whichPage = fl end
    return fl
end


-- Figure out the original title and link for the original wiki.
local whichWiki = function(metadata)
    local title, link = '', ''
    if 'PmWiki'  == metadata.ogWiki then
	title = metadata.ogBase .. '.'    .. metadata.ogFile
	link  = metadata.ogURL  .. '/?n=' .. metadata.ogBase .. '.' .. metadata.ogFile
    end
    if 'Foswiki' == metadata.ogWiki then
	title = metadata.ogBase .. '/'    .. metadata.ogFile
	link  = metadata.ogURL  .. '/'    .. metadata.ogBase .. '/' .. metadata.ogFile
    end
    return title, link
end


-- Calculate a link from the source directory to the destination directory.
local linkFrom = function(source, dest)
    -- Evil hacks!
    if 'Profiles' == dest then dest = 'PmWiki/Profiles' end
    if 'Onefang'  == dest then dest = 'PmWiki/Onefang' end

    if source == dest then return '' end
    local depth = 0
    local lnk = ''
    if source ~= dest then
	if nil == Subs[source] then
--	    print('!!!! No idea where to find source ' .. source)
	    return 'DUNNO'
	end
	if nil == Subs[dest] then
	    if dest == Subs[source].bit then
		return ''
	    else
--		print('!!!! No idea where to find dest   ' .. dest .. ' from ' .. Subs[source].path .. ' / ' .. Subs[source].bit)
		return 'DUNNO'
	    end
	end
	local s = Subs[source].bits
	local d = Subs[dest].bits
	local sl = #s
	local dl = #d

	if 0 == dl then
	    depth = sl
	else
	    for i, v in ipairs(s) do
		if (nil == d[i]) or (v ~= d[i]) then
		    depth = i
		    break
		end
	    end
	end
	-- depth is where they DON'T match.
	local m = depth - 1
	if 0 > m then m = 0 end
	lnk = string.rep('../', sl - m)
	if 0 ~= (m + 1) then lnk = lnk .. table.concat(d, '/', m + 1, dl) end
    end
    return lnk
end



---------------------------------------------------------------------------------
-- More of this actually doing things nonsense.

-- Create an "everything" page, for URL links to every file.HTML.
local Bdy = '# All the pages\n\n| page | converted | original page | last edited UTC | \n| ---- | --------- | ------- | --------------- | '
Pages = {}
for name, file in pairs(Files) do
    local metadata = derefTable(Files[name].metadata, true)
    if ('everything' ~= name) then
	local ln, fw, pw, ts = 'DUNNO', '', '', ''
	local title, link = whichWiki(metadata)
	link = string.gsub(link, 'https://', 'HTTPS://')	-- Prevent this one from being converted.
	if 'PmWiki'  == metadata.ogWiki then pw = 'PmWiki  [' .. title .. '](' .. link .. ')' end
	if 'Foswiki' == metadata.ogWiki then fw = 'Foswiki [' .. title .. '](' .. link .. ')' end
	if nil       ~= metadata.timestamp then ts = metadata.timestamp end
	if nil ~= file.bit   then ln = file.bit
	end
	table.insert(Pages, '\n| ' .. name .. ' | [' .. ln .. '](<' .. name .. '.HTML>) | ' .. fw .. '  ' .. pw .. ' | ' .. ts .. ' |')

	-- Track our external links.
	if (nil ~= metadata.ogBase) and (nil ~= metadata.ogFile) then
	    local n = metadata.ogBase
	    if 'PmWiki'  == metadata.ogWiki then n = n .. '.' else n = n .. '/' end
	    xLinks[n .. metadata.ogFile] = file.path
	end
    end
end
table.sort(Pages, function(a, b) return (string.lower(a) < string.lower(b))  end)
for i, f in ipairs(Pages) do
    Bdy = Bdy .. f
end
h = io.open('everything.md', 'a+')
if nil ~= h then
    h:write(Bdy)
    h:close()
else
    print("Can't open everything.md for writing.")
end
toFile('everything', 'body', Bdy)


-- Loop through Subs, doing whichPage and inheritance.
-- It gets to testing/even/deeper BEFORE it gets to testing/even sometimes.  So sort them.
SUBS = {}
for name, sub in pairs(Subs) do
    table.insert(SUBS, sub)
end
table.sort(SUBS, function(a, b) return (string.lower(a.path) < string.lower(b.path))  end)
for n, sub in pairs(SUBS) do
    local name = sub.path
    sub.whichPage = whichPage(name)
    local metadata = sub.metadata
    for i, s in pairs(sub.subs) do
	local nm = i
	if '' ~= name then nm = name .. '/' .. i end
	for k, v in pairs(metadata) do
	    if nil == Subs[nm].metadata[k] then
		if ('favicon' == k) or ('logo' == k) then
		    Subs[nm].metadata[k] = linkFrom(nm, name) .. v
		else
		    if 'hidden' ~= k then	-- Don't inherit hidden.
			Subs[nm].metadata[k] = v
		    end
		end
	    end
	end
    end
end

-- Files inheritance.
for name, file in pairs(Files) do
    if '' ~= file.body then
	local mdata = Subs[file.path].metadata
	for k, v in pairs(mdata) do
	    if nil == file.metadata[k] then
		Files[name].metadata[k] = v
	    end
	end
    end
end


---------------------------------------------------------------------------------
-- Setup the lunarmark stuff.
local LunamarkOpts = {
    layout='compact',
-- This list is copied from the lunamark source code, until I discover a way to discover it.  The descriptions are useful to.
    containers=false,            -- Put sections in containers (e.g. div or section tags)
    slides=false,                -- Like containers, but do not nest them
    startnum=true,               -- Start number of an ordered list is significant
    smart=false,                 -- Smart typography (quotes, dashes, ellipses)
    preserve_tabs=true,          -- Don't expand tabs to spaces
    notes=true,                  -- Footnotes
    inline_notes=true,           -- Inline footnotes
    definition_lists=true,       -- Definition lists
    citations=true,              -- Citations
    citation_nbsps=true,         -- Turn spacing into non-breaking spaces in citations
    fenced_code_blocks=true,     -- Fenced code blocks
    lua_metadata=true,           -- Lua metadata
    pandoc_title_blocks=true,    -- Pandoc style title blocks
    hash_enumerators=true,       -- may be used as ordered list enumerator
    require_blank_before_blockquote=false,
    require_blank_before_header=false,
    require_blank_before_fenced_code_block=false,
    fancy_lists=true,            -- Pandoc style fancy lists
    task_list=true,              -- GitHub-Flavored Markdown task list
    strikeout=true,              -- Strike-through with double tildes
    mark=true,                   -- Highlight with double equals
    subscript=true,              -- Subscripted text between tildes
    superscript=true,            -- Superscripted text between circumflexes
    bracketed_spans=true,        -- Spans with attributes
    fenced_divs=true,            -- Divs with attributes
    raw_attribute=true,          -- Raw pass-through on code elements
    fenced_code_attributes=true, -- Fenced code block attributes
    link_attributes=true,        -- Link attributes
    pipe_tables=true,            -- PHP Markdown Extra pipe table support
    table_captions=true,         -- Table caption syntax extension
    header_attributes=true,      -- Header attributes
    line_blocks=true,            -- Line blocks
    escaped_line_breaks=true,    -- Pandoc-style escaped hard line breaks
}
local Writer = Lunamark.writer.html5.new(LunamarkOpts)

-- Can override the various writer functions, there's something for each of the basic HTML elements.
local Context = {}			-- Coz can't otherwise pass context through to the deeper Lunamark functions I'm overriding.
-- Fix up the links.
local OgWriterLink = Writer.link	-- So we can call the original from within mine, we are just changing the URL.
function Writer.link(lab, url, tit)
    if ('https://wiki.devuan.org/' ~= url) and ('https://fos.wiki.devuan.org/' ~= url) then
	local label = lab
	local uri = url
	if 'string' ~= type(lab) then label = type(lab) end
	for i, p in ipairs{'https://wiki.devuan.org/?n=', 'https://wiki.devuan.org?n=', 'https://fos.wiki.devuan.org/'} do
	    if p == string.sub(url, 1, #p) then
		local ur = string.sub(url, #p + 1)
-- TODO - could probably replace some of this mess with RE.gsub() and friends.  Meh, it works.
		local f4, f5, tk1 = string.find(ur, '?', 1, true)
		if fail ~= f4 then
		    local u = string.sub(ur, 1, f4 - 1)
		    ur = u
		end
		if nil == Context.path then
		    url = string.gsub(ur, '%.', '/', 1)
		else
		    local xlnk = xLinks[string.gsub(ur, '%..*', '', 1)]
		    if nil == xlnk then xlnk = string.gsub(ur, '%..*', '', 1) end
		    if '' ~= Context.path then xlnk = linkFrom(Context.path, xlnk) end
		    if '/' == string.sub(xlnk, 1, 1) then xlnk = string.sub(xlnk, 2) end
		    if ('' ~= xlnk) and ('/' ~= string.sub(xlnk, -1)) then xlnk = xlnk .. '/' end
		    if 'DUNNO/' == xlnk then print('OOPS! Page not found - ' .. Context.path .. ' / ' .. Context.bit .. ' ' .. url .. ' -> ' .. xlnk .. ' ' .. string.gsub(ur, '.*%.', '', 1) .. '.HTML') end
		    url = xlnk .. string.gsub(ur, '.*%.', '', 1) .. '.HTML'
		end
	    end
	end
    end
    return OgWriterLink(lab, url, tit)
end
local Parse = Lunamark.reader.markdown.new(Writer, LunamarkOpts)


---------------------------------------------------------------------------------
-- Loop through the files we found and actually create their HTML files.
for name, file in pairs(Files) do
    local body, metadata = Files[name].body, derefTable(Files[name].metadata, true)
    local bits, bit = Files[name].bits, Files[name].bit
    local ln = #bits
    local result = ''

    if '' ~= body then
	-- Figure out this pages trail links.
	metadata.home = linkFrom(file.path, '') .. Subs[''].whichPage
	metadata.trail = ''
	for i, b in ipairs(bits) do
	    local p = table.concat(bits, '/', 1, i)
	    if i < #bits then
		metadata.trail = metadata.trail .. '<a href="' .. linkFrom(file.path, p) .. Subs[p].whichPage .. '">' .. b .. '</a> &#x1f463; &nbsp; '
		linkFrom(file.path, table.concat(bits, '/', 1, i))
	    else
		metadata.trail = metadata.trail ..  b .. ' &nbsp; '
	    end
	end

	-- Figure out this pages header links.
	metadata.header = ''
	subs = {}
	for i, f in pairs(Subs[file.path].subs) do
	    table.insert(subs, f)
	end
	table.sort(subs, function(a, b) return (string.lower(a) < string.lower(b))  end)
	for i, f in ipairs(subs) do
	    local pth = file.path
	    if '' ~= file.path then pth = file.path .. '/' end
	    if 'true' ~= Subs[pth .. f].metadata.hidden then
		metadata.header = metadata.header .. '<a href="' .. f .. '/' .. whichPage(pth .. f) .. '">' .. f .. '</a> &nbsp; '
	    end
	end

	-- Figure out this pages menu links.
	metadata.menu = ''
	if nil == metadata.title then metadata.title = bit end
	if nil ~= Subs[file.path].files then table.sort(Subs[file.path].files, function(a, b) return (string.lower(a) < string.lower(b))  end)  end
	for i, f in ipairs(Subs[file.path].files) do
	    local title, url = nil, nil
	    if '' == file.path then
		title = Files[f].metadata.title
		url   = Files[f].metadata.URL
	    else
		title = Files[file.path .. '/' .. f].metadata.title
		url   = Files[file.path .. '/' .. f].metadata.URL
	    end
	    if nil == title then title = f end
	    if bit == f then		metadata.menu = metadata.menu .. '<p>' .. title .. '</p>'
	    else
		if nil ~= url then	metadata.menu = metadata.menu .. '<p><a href="' .. url .. '">'      .. title .. ' &#9757;</a></p>'
		else			metadata.menu = metadata.menu .. '<p><a href="' .. f   .. '.HTML">' .. title .. '</a></p>'
		end
	    end
	end

	-- Figure out this pages footer links.
	metadata.footer = GlobalMetaData.footer
	if nil ~= metadata.pagehistory then metadata.history = '<p>Page&nbsp;<a href="' .. metadata.pagehistory .. '/' .. name .. '.md">history</a></p>' else metadata.history = '' end
	if nil ~= metadata.sourcecode	then metadata.footer = '<a href="' .. metadata.sourcecode	.. '">source code</a> &nbsp; &nbsp; ' .. metadata.footer    end
	if nil ~= metadata.feedatom		then metadata.footer = '<a href="' .. metadata.feedatom		..   '">atom feed</a> &nbsp; &nbsp; ' .. metadata.footer    end
	if metadata.footer ~= GlobalMetaData.footer then metadata.footer = 'Web site ' .. metadata.footer end
	-- Add a link to the original page.
	if nil ~= metadata.ogURL then
	    local title, link = whichWiki(metadata)
	    link = string.gsub(link, 'https://', 'HTTPS://')	-- Prevent this one from being converted.
	    metadata.footer = '<a href="' .. link .. '">Original page</a>, maybe you can edit it. &nbsp; ' .. metadata.footer
	end
	metadata.footer = '<p>' .. metadata.footer .. '</p>'

	-- Do our own metadata replacement, it's simple and works better.
	local temp = Template
	-- Toss the body in first, so the scan can deal with it to.
	-- NOTE - this is where we actually parse the markup into HTML.
	Context = file
	local bd, md = Parse(body)		-- The md is a table of extracted metadata, not likely to be any, and we wont do anything with it.
	bd = RE.gsub(bd, '{[%]}', '$perc$')	-- Coz otherwise stray % trip up the capture part.
	temp = RE.gsub(temp, '"$body$"', bd)
	-- The actual metadata replacement.
	result = RE.compile ('{~ ({[$][A-Za-z_]+[$]} -> meta / .)* ~}',
	{
	    meta = function(a)
		a = string.sub(a, 2, -2)
		local md = metadata[a]
		if nil == md then
		    md = GlobalMetaData[a]
		    if nil == md then
			md = a
		    end
		end
		return md
	    end
	} ):match(temp)

	-- Write the file.
	if '' ~= result then
--	    print('From ' .. name .. '.md -> ' .. base)
	    writeString(name .. '.HTML', result)
	end
    end
end